Reaction-Diffusion (RXD) Tutorials
===================================

NEURON's **rxd** module lets you model intracellular and extracellular
chemistry --- calcium dynamics, IP\ :sub:`3` signaling, buffering, gene
regulation, and more --- alongside electrophysiology. Start with the
main tutorial, then explore the examples below.

See also: :ref:`neuron_rxd` in the Programmer's Reference.

.. toctree::
   :maxdepth: 2
   :caption: Core Tutorials

   Reaction-Diffusion tutorial
   basic-initialization
   Changing initial conditions and parameters
   radial_diffusion
   thresholds
   extracellular
   Restricting reactions to certain sections

.. toctree::
   :maxdepth: 1
   :caption: Application Examples

   degradable_buffer
   circadian
   calcium waves
   combining currents from mod files with rxd
   ip3-demo